STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT82643.1PAS/PAC sensor signal transduction histidine kinase. (357 aa)    
Predicted Functional Partners:
ntrC
Nitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 0.992
SFT88213.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.985
SFT85942.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.974
SFT86821.1
Nitrogen regulatory protein P-II family.
  
 0.964
SFT41951.1
PAS domain S-box-containing protein.
 
 
 0.958
SFT60417.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.953
SFT70310.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
   
 0.933
SFT60073.1
PAS domain S-box-containing protein.
  
 0.932
SFT78440.1
Na+/proline symporter.
  
 0.932
SFT50966.1
PAS domain S-box-containing protein.
 
 
0.924
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.