Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFT38138.1 | SFT61717.1 | SAMN04515657_0205 | SAMN04515657_1410 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.710 |
| SFT38138.1 | SFT83186.1 | SAMN04515657_0205 | SAMN04515657_2322 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Penicillin-binding protein 1A. | 0.837 |
| SFT38138.1 | ftsI | SAMN04515657_0205 | SAMN04515657_1831 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.721 |
| SFT38138.1 | ftsW | SAMN04515657_0205 | SAMN04515657_1826 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.725 |
| SFT38138.1 | mrdA | SAMN04515657_0205 | SAMN04515657_0209 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.899 |
| SFT38138.1 | mrdB | SAMN04515657_0205 | SAMN04515657_0208 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.905 |
| SFT61717.1 | SFT38138.1 | SAMN04515657_1410 | SAMN04515657_0205 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.710 |
| SFT61717.1 | SFT83186.1 | SAMN04515657_1410 | SAMN04515657_2322 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.913 |
| SFT61717.1 | ftsI | SAMN04515657_1410 | SAMN04515657_1831 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.957 |
| SFT61717.1 | ftsW | SAMN04515657_1410 | SAMN04515657_1826 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.828 |
| SFT61717.1 | mrdA | SAMN04515657_1410 | SAMN04515657_0209 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.953 |
| SFT61717.1 | mrdB | SAMN04515657_1410 | SAMN04515657_0208 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.827 |
| SFT61717.1 | murA | SAMN04515657_1410 | SAMN04515657_1853 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.555 |
| SFT61717.1 | murC | SAMN04515657_1410 | SAMN04515657_1824 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.475 |
| SFT71085.1 | SFT83186.1 | SAMN04515657_1838 | SAMN04515657_2322 | Hypothetical protein. | Penicillin-binding protein 1A. | 0.864 |
| SFT83186.1 | SFT38138.1 | SAMN04515657_2322 | SAMN04515657_0205 | Penicillin-binding protein 1A. | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.837 |
| SFT83186.1 | SFT61717.1 | SAMN04515657_2322 | SAMN04515657_1410 | Penicillin-binding protein 1A. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.913 |
| SFT83186.1 | SFT71085.1 | SAMN04515657_2322 | SAMN04515657_1838 | Penicillin-binding protein 1A. | Hypothetical protein. | 0.864 |
| SFT83186.1 | SFT83251.1 | SAMN04515657_2322 | SAMN04515657_2326 | Penicillin-binding protein 1A. | Type IV pilus assembly protein PilQ. | 0.683 |
| SFT83186.1 | ftsI | SAMN04515657_2322 | SAMN04515657_1831 | Penicillin-binding protein 1A. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.874 |
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