STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT86954.1Ketosteroid isomerase homolog. (144 aa)    
Predicted Functional Partners:
SFT86967.1
Putative copper resistance protein D.
 
     0.953
SFT86984.1
Hypothetical protein.
 
     0.924
SFT86995.1
Copper resistance protein B.
 
     0.853
SFT86945.1
Amino acid transporter.
 
     0.843
SFT87031.1
Uncharacterized conserved protein.
 
     0.818
tatA-2
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
     0.797
SFT87008.1
Copper-resistance protein, CopA family.
 
     0.781
SFT66346.1
4'-phosphopantetheinyl transferase.
  
     0.700
SFT86572.1
Outer membrane protein TolC.
  
     0.690
SFT86919.1
TonB-dependent Receptor Plug Domain.
  
     0.607
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.