STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT88385.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
SFT88397.1
Protein of unknown function, DUF547.
 
     0.886
SFT88379.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.832
SFT88408.1
Protein of unknown function.
 
     0.739
SFT88342.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.652
SFT88310.1
Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
     0.514
SFT88286.1
Putative thiamine transport system permease protein.
 
     0.504
SFT88296.1
Putative thiamine transport system substrate-binding protein.
 
     0.468
SFT59661.1
NAD(P)H-dependent FMN reductase.
  
     0.463
SFT88264.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.434
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.