STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT88957.1Adenylylsulfate kinase. (202 aa)    
Predicted Functional Partners:
SFT89029.1
Sulfate adenylyltransferase subunit 1.
 
 0.998
SFT89041.1
Sulfate adenylyltransferase subunit 2.
 0.998
cysQ-2
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
 
 0.950
SFT64819.1
MioC protein.
  
  
 0.909
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
   
  0.845
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
 
 0.752
SFT40756.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 0.666
SFT88993.1
Tetratricopeptide repeat-containing protein.
    
  0.609
SFT69587.1
Sulfotransferase domain-containing protein.
 
  
  0.603
SFT51839.1
Uncharacterized membrane protein.
    
  0.602
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.