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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPD24758.1Transposase; Required for the transposition of the insertion element. (128 aa)    
Predicted Functional Partners:
KPD20430.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.744
KPD20278.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.569
KPD23938.1
Transposase; Required for the transposition of the insertion element.
 
     0.442
KPD23576.1
Transposase; Required for the transposition of the insertion element.
 
     0.442
KPD23495.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
KPD23108.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
KPD21045.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
KPD20783.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
KPD24422.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
mazG
Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.438
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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