STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPD24651.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family. (107 aa)    
Predicted Functional Partners:
KPD25088.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.996
KPD23839.1
Chromosome partitioning protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.792
KPD24642.1
Aminotransferase class V; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.788
KPD24218.1
Cell division protein BolA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.
    
 0.740
KPD23143.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.725
KPD23145.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.725
KPD24764.1
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.718
KPD24420.1
ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.718
KPD23630.1
(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.718
KPD23432.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.711
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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