STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPD24657.1Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)    
Predicted Functional Partners:
KPD24654.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
KPD24655.1
Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
KPD24656.1
Paraquat-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
KPD23511.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
smc
Chromosome partitioning protein ParA; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
  0.748
msbA
Lipid transporter ATP-binding/permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
 0.739
KPD24138.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.739
KPD24663.1
Calcium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.672
KPD23534.1
Bis(5'-nucleosyl)-tetraphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.667
KPD24986.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.598
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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