Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPD24660.1Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (352 aa)    
Predicted Functional Partners:
KPD24659.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KPD24658.1
Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
KPD24661.1
Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.772
KPD24222.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.639
cysD
Sulfate adenylyltransferase subunit 2; With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.511
prpE
Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
KPD24657.1
Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
KPD23751.1
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.494
KPD24654.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.481
KPD24655.1
Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.481
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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