Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPD23447.1General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
KPD23444.1
General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
KPD23450.1
Type II secretory pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
KPD23449.1
General secretion pathway protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.978
KPD23445.1
General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.972
KPD23443.1
Type II secretory pathway, component PulC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
KPD23446.1
General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.969
KPD23448.1
Type II secretory pathway, component PulH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.936
KPD23451.1
Type II secretory pathway, component pull; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.874
KPD24182.1
Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.839
KPD24252.1
MSHA biogenesis protein MshE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.796
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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