Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPD23275.1Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)    
Predicted Functional Partners:
KPD23274.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
KPD23277.1
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.976
KPD23276.1
Anticodon nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
KPD20919.1
Type I restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
KPD20788.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.889
KPD23426.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.727
KPD23278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.676
KPD23273.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
KPD24790.1
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.576
KPD20636.1
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.576
Your Current Organism:
Idiomarina zobellii
NCBI taxonomy Id: 86103
Other names: ATCC BAA-313, I. zobellii, Idiomarina zobellii Ivanova et al. 2000, KMM 231, marine bacterium KM231
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