STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIE06098.1Type IV secretory pathway VirB3 component; Product derived from UniProtKB/Trembl:I7JEB2. (96 aa)    
Predicted Functional Partners:
KIE06097.1
Type IV secretion system ATPase VirB4; Product derived from UniProtKB/Trembl:H8KBT9.
 
 
 0.998
virB8_2
Type IV secretion system protein VirB8; Product derived from UniProtKB/Trembl:F7XVQ5;Gene name derived from UniProtKB/Trembl:F7XVQ5.
 
 
 0.997
KIE06095.1
Hypothetical protein.
 
  
 0.983
KIE06096.1
Hypothetical protein.
 
  
 0.981
KIE04487.1
Hypothetical protein.
 
 
 0.974
trbE_2
Conjugal transfer protein TrbE; Product derived from UniProtKB/Swiss-Prot:P54910;Gene name derived from UniProtKB/Swiss-Prot:P54910.
  
 
 0.958
KIE04244.1
Hypothetical protein.
  
 
 0.958
KIE06093.1
Putative type IV secretion system protein; Product derived from UniProtKB/Trembl:F7XWE7.
  
  
 0.949
KIE05965.1
Putative type IV secretion system protein; Product derived from UniProtKB/Trembl:F7XWY0.
 
  
 0.935
virB9_2
Type IV secretion system protein VirB9; Product derived from UniProtKB/Trembl:F7XVQ4;Gene name derived from UniProtKB/Trembl:F7XVQ4.
 
  
 0.929
Your Current Organism:
Jidaibacter acanthamoeba
NCBI taxonomy Id: 86105
Other names: C. Jidaibacter acanthamoeba, Candidatus Jidaibacter acanthamoeba, endosymbiont of Acanthamoeba sp. UWC36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.