STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdlB_2ABC efflux transporter permease/ATP-binding protein; Product derived from UniProtKB/Trembl:F7XTP9;Gene name derived from UniProtKB/Trembl:F7XTP9;EC number derived from UniProtKB/Trembl:F7XTP9. (596 aa)    
Predicted Functional Partners:
KIE06022.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:K1ZNW3.
 
 
 
0.928
KIE05742.1
Hypothetical protein.
  
 
 0.925
KIE05428.1
Hypothetical protein.
    
  0.893
KIE05419.1
ABC transporter ATP-binding protein; Product derived from UniProtKB/Trembl:M4VJP4.
   
 0.854
recG
RecG-like helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.773
KIE05894.1
Hypothetical protein.
  
  0.647
htrA_2
Putative periplasmic serine endoprotease DegP-like; Product derived from UniProtKB/Swiss-Prot:Q92JA1;Gene name derived from UniProtKB/Swiss-Prot:Q92JA1;EC number derived from UniProtKB/Swiss-Prot:Q92JA1; Belongs to the peptidase S1C family.
    
  0.645
aas_2
Bifunctional protein aas; Product derived from UniProtKB/Swiss-Prot:B2TYQ5;Gene name derived from UniProtKB/Swiss-Prot:B2TYQ5;EC number derived from UniProtKB/Swiss-Prot:B2TYQ5.
   
 0.495
lpxK
Hypothetical protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.494
KIE05895.1
Hypothetical protein.
 
    0.491
Your Current Organism:
Jidaibacter acanthamoeba
NCBI taxonomy Id: 86105
Other names: C. Jidaibacter acanthamoeba, Candidatus Jidaibacter acanthamoeba, endosymbiont of Acanthamoeba sp. UWC36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.