STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIE05041.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
KIE05042.1
Hypothetical protein.
      0.843
lipA_3
Capsule polysaccharide modification protein LipA; Product derived from UniProtKB/Swiss-Prot:P57037;Gene name derived from UniProtKB/Swiss-Prot:P57037.
       0.559
KIE05040.1
Hypothetical protein.
       0.559
KIE05036.1
Hypothetical protein.
       0.556
kpsT_2
Polysialic acid transport ATP-binding protein KpsT; Product derived from UniProtKB/Swiss-Prot:P23888;Gene name derived from UniProtKB/Swiss-Prot:P23888.
       0.556
KIE05038.1
Hypothetical protein.
       0.556
Your Current Organism:
Jidaibacter acanthamoeba
NCBI taxonomy Id: 86105
Other names: C. Jidaibacter acanthamoeba, Candidatus Jidaibacter acanthamoeba, endosymbiont of Acanthamoeba sp. UWC36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.