STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIE04541.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
KIE04730.1
Hypothetical protein.
  
     0.774
KIE04540.1
Hypothetical protein.
       0.773
KIE05748.1
Hypothetical protein.
  
     0.771
KIE06214.1
Resolvase domain protein; Product derived from UniProtKB/Trembl:M4SNM6.
  
     0.656
yoeB_2
Toxin YoeB; Product derived from UniProtKB/Swiss-Prot:P69349;Gene name derived from UniProtKB/Swiss-Prot:P69349;EC number derived from UniProtKB/Swiss-Prot:P69349.
       0.620
yefM_2
Antitoxin YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.620
KIE04539.1
Hypothetical protein.
       0.460
KIE04544.1
Hypothetical protein.
       0.421
Your Current Organism:
Jidaibacter acanthamoeba
NCBI taxonomy Id: 86105
Other names: C. Jidaibacter acanthamoeba, Candidatus Jidaibacter acanthamoeba, endosymbiont of Acanthamoeba sp. UWC36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.