STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF80848.1COG3562 Capsule polysaccharide export protein. (399 aa)    
Predicted Functional Partners:
AIF80847.1
COG3563 Capsule polysaccharide export protein.
   
 0.985
AIF80846.1
COG3524 Capsule polysaccharide export protein.
 
 
 
 0.959
AIF80844.1
COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
   
 0.954
AIF80845.1
COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
   
 0.950
AIF81531.1
COG4786 Flagellar basal body rod protein.
    
   0.620
AIF80849.1
Hypothetical protein.
       0.561
AIF80850.1
Hypothetical protein.
       0.521
AIF80843.1
Hypothetical protein.
       0.514
AIF80905.1
COG4092 Predicted glycosyltransferase involved in capsule biosynthesis.
  
     0.448
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.