STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF80885.1COG1714 Predicted membrane protein/domain. (206 aa)    
Predicted Functional Partners:
tatC
TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
   
 0.803
serS
seryl-tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.781
AIF80888.1
Hypothetical protein.
       0.693
AIF80860.1
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.665
AIF81851.1
Type IV secretion system protein VirB6.
  
     0.631
AIF81850.1
Type IV secretion system protein; COG3704 Type IV secretory pathway, VirB6 components.
  
     0.617
AIF81456.1
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
    0.586
AIF80884.1
Hypothetical protein.
       0.553
AIF80905.1
COG4092 Predicted glycosyltransferase involved in capsule biosynthesis.
  
     0.528
AIF80926.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
  
    0.521
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.