STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF80909.1COG3660 Predicted nucleoside-diphosphate-sugar epimerase. (171 aa)    
Predicted Functional Partners:
AIF80908.1
Hypothetical protein.
      0.839
AIF81217.1
Hypothetical protein.
  
     0.700
AIF81664.1
COG0438 Glycosyltransferase.
  
     0.697
AIF81189.1
Outer membrane protein porin.
  
     0.665
AIF81104.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
     0.656
AIF81477.1
Hypothetical protein.
  
     0.648
AIF80858.1
Hypothetical protein.
  
     0.626
AIF81313.1
Hypothetical protein.
  
     0.567
AIF81102.1
COG0515 Serine/threonine protein kinase.
  
     0.565
AIF80779.1
COG3164 Predicted membrane protein.
  
     0.556
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.