Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AIF80981.1Integrase; COG2801 Transposase and inactivated derivatives. (271 aa)    
Predicted Functional Partners:
AIF80982.1
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
  
    0.635
AIF80980.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
       0.490
AIF80984.1
Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives.
 
    
0.486
AIF80983.1
COG2963 Transposase and inactivated derivatives.
  
    0.447
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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