STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF80982.1Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives. (101 aa)    
Predicted Functional Partners:
AIF80981.1
Integrase; COG2801 Transposase and inactivated derivatives.
  
    0.641
AIF80983.1
COG2963 Transposase and inactivated derivatives.
       0.522
AIF80984.1
Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives.
  
    0.420
AIF80980.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
       0.408
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.