STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF81190.1COG3203 Outer membrane protein (porin). (421 aa)    
Predicted Functional Partners:
AIF81771.1
VacJ like lipoprotein; COG2853 Surface lipoprotein.
  
 
 
 0.797
AIF81851.1
Type IV secretion system protein VirB6.
  
    0.770
AIF80860.1
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.739
AIF81823.1
COG2825 Outer membrane protein.
  
 
 
 0.735
AIF81217.1
Hypothetical protein.
  
     0.727
AIF81102.1
COG0515 Serine/threonine protein kinase.
  
     0.722
AIF81957.1
Hypothetical protein.
 
     0.718
AIF81850.1
Type IV secretion system protein; COG3704 Type IV secretory pathway, VirB6 components.
  
    0.715
AIF80899.1
Adhesin/invasin protein PagN; COG3637 Opacity protein and related surface antigens.
  
 
 0.714
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.678
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.