STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF81591.1Putative type IV secretion system protein; COG3736 Type IV secretory pathway, component VirB8. (239 aa)    
Predicted Functional Partners:
AIF81507.1
COG3736 Type IV secretory pathway, component VirB8.
     
  0.900
AIF81853.1
COG3702 Type IV secretory pathway, VirB3 components.
  
 
 0.898
AIF81852.1
COG3451 Type IV secretory pathway, VirB4 components.
  
 
 0.896
AIF81024.1
COG3451 Type IV secretory pathway, VirB4 components.
  
 
 0.886
AIF81590.1
Putative type IV secretion system protein; COG3504 Type IV secretory pathway, VirB9 components.
  
  
 0.872
AIF81509.1
COG2948 Type IV secretory pathway, VirB10 components.
  
  
 0.867
AIF81508.1
COG3504 Type IV secretory pathway, VirB9 components.
  
  
 0.704
AIF81510.1
Type IV secretion system ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
  
 0.687
AIF81462.1
COG3704 Type IV secretory pathway, VirB6 components.
  
  
 0.545
AIF81849.1
Putative type IV secretion system protein; COG3704 Type IV secretory pathway, VirB6 components.
  
  
 0.545
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.