STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF81974.1COG1126 ABC-type polar amino acid transport system, ATPase component. (230 aa)    
Predicted Functional Partners:
AIF81973.1
COG0765 ABC-type amino acid transport system, permease component.
 0.999
AIF81972.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 0.998
AIF80692.1
ABC transporter family protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
    
0.901
argR
Arginine repressor; Regulates arginine biosynthesis genes.
     
 0.685
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.630
AIF81975.1
Hypothetical protein.
       0.503
AIF81976.1
Flagellin-like protein; COG1344 Flagellin and related hook-associated proteins.
       0.503
AIF82005.1
Mannose-1-phosphate guanylyltransferase/mannose- 6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
   
  
 0.497
pheT
phenylalanyl-tRNA ligase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
      
 0.461
argH
COG0165 Argininosuccinate lyase.
 
    0.408
Your Current Organism:
endosymbiont of Acanthamoeba
NCBI taxonomy Id: 86106
Other names: e. of Acanthamoeba sp. UWC8, endosymbiont of Acanthamoeba sp. UWC8
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