STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ45551.1ftsK/SpoIIIE family protein. (1361 aa)    
Predicted Functional Partners:
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.985
spk1
Kinase domain protein.
  
 
 0.948
pknA
Kinase domain protein.
  
 
 0.948
pknB
Serine/threonine-protein kinase pknB.
  
 
 0.948
CCQ47110.1
Response regulator.
 
 
 0.935
CCQ47401.1
S of 100 residues with WXG family protein; Belongs to the WXG100 family.
 
 
 0.832
morA
Sensory box protein.
  
 
 0.826
CCQ46650.1
Cell division FtsQ family protein.
   
 
 0.822
CCQ45257.1
Putative uncharacterized protein.
 
 
 0.816
CCQ48496.1
Putative uncharacterized protein.
 
 
 0.815
Your Current Organism:
Pseudarthrobacter siccitolerans
NCBI taxonomy Id: 861266
Other names: Arthrobacter siccitolerans, Arthrobacter siccitolerans Santacruz-Calvo et al. 2013, Arthrobacter sp. 4J27, CECT 8257, LMG 27359, LMG:27359, P. siccitolerans, Pseudarthrobacter siccitolerans (SantacCruz-Calvo et al. 2013) Busse 2016, strain 4J27
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