STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ46391.1Putative uncharacterized protein. (270 aa)    
Predicted Functional Partners:
CCQ46390.1
Putative membrane protein.
       0.566
CCQ46389.1
Radical SAM superfamily protein.
       0.415
Your Current Organism:
Pseudarthrobacter siccitolerans
NCBI taxonomy Id: 861266
Other names: Arthrobacter siccitolerans, Arthrobacter siccitolerans Santacruz-Calvo et al. 2013, Arthrobacter sp. 4J27, CECT 8257, LMG 27359, LMG:27359, P. siccitolerans, Pseudarthrobacter siccitolerans (SantacCruz-Calvo et al. 2013) Busse 2016, strain 4J27
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