STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049495_01611Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_001049495_01609
Unannotated protein.
 
     0.953
GCA_001049495_01610
Unannotated protein.
 
     0.903
GCA_001049495_01612
Unannotated protein.
 
     0.891
GCA_001049495_01608
Unannotated protein.
 
     0.883
GCA_001049495_01607
Unannotated protein.
 
     0.798
GCA_001049495_01621
Unannotated protein.
 
     0.778
GCA_001049495_01620
Unannotated protein.
  
     0.747
GCA_001049495_01604
Unannotated protein.
 
     0.716
GCA_001049495_01617
Unannotated protein.
  
     0.613
GCA_001049495_01613
Unannotated protein.
 
     0.532
Your Current Organism:
Microbacterium sp. 3J1
NCBI taxonomy Id: 861269
Other names: M. sp. 3J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.