Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049495_02027Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_001049495_02028
Unannotated protein.
 
 
  0.950
GCA_001049495_02030
Unannotated protein.
 
   
 0.950
GCA_001049495_02026
Unannotated protein.
 
   
 0.945
GCA_001049495_02025
Unannotated protein.
 
   
 0.936
GCA_001049495_02029
Unannotated protein.
 
     0.923
GCA_001049495_02033
Unannotated protein.
 
  
 0.829
GCA_001049495_02036
Unannotated protein.
  
     0.743
GCA_001049495_02230
Unannotated protein.
  
 
  0.665
GCA_001049495_02031
Unannotated protein.
 
  
  0.589
GCA_001049495_02024
Unannotated protein.
       0.550
Your Current Organism:
Microbacterium sp. 3J1
NCBI taxonomy Id: 861269
Other names: M. sp. 3J1
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