STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG73154.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (437 aa)    
Predicted Functional Partners:
SDG73124.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.996
SDG73140.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.973
SDH06463.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.944
SDG83216.1
Oligogalacturonide transport system permease protein.
 
 0.941
SDG83197.1
Oligogalacturonide ABC transporter membrane protein.
 
 0.926
SDH01667.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 0.925
SDG77501.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.915
SDG88913.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.915
SDH01686.1
Multiple sugar transport system permease protein.
 
 0.907
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.902
Your Current Organism:
Vibrio xiamenensis
NCBI taxonomy Id: 861298
Other names: CGMCC 1.10228, DSM 22851, V. xiamenensis, Vibrio sp. G21, Vibrio xiamenensis Gao et al. 2012, strain G21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.