STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG81767.1MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein. (396 aa)    
Predicted Functional Partners:
SDI08795.1
HxxPF-repeated domain-containing protein.
  
 
 0.759
SDH35557.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.658
SDH27657.1
Chorismate mutase.
  
 
 0.625
SDH27530.1
Chorismate mutase.
  
 
 0.564
SDH01553.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.530
SDG97077.1
Diaminobutyrate-2-oxoglutarate transaminase.
    
  0.508
SDH57235.1
Amino acid adenylation domain-containing protein.
  
 
 0.466
SDG81745.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.453
SDH23038.1
Hypothetical protein.
 
   
 0.411
Your Current Organism:
Vibrio xiamenensis
NCBI taxonomy Id: 861298
Other names: CGMCC 1.10228, DSM 22851, V. xiamenensis, Vibrio sp. G21, Vibrio xiamenensis Gao et al. 2012, strain G21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.