STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG99048.1Two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ. (859 aa)    
Predicted Functional Partners:
SDG64371.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.999
SDG77934.1
Polar amino acid transport system substrate-binding protein.
 
 0.999
SDG89422.1
Polar amino acid transport system substrate-binding protein.
 
 0.999
SDH24182.1
Two-component system, NarL family, sensor histidine kinase EvgS.
 
0.999
SDH26374.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
 
0.999
SDH25711.1
Signal transduction histidine kinase.
 
0.999
SDG99020.1
Autoinducer 2-binding protein LuxP.
 
 
 0.995
SDG82835.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.990
SDG99620.1
Response regulator receiver modulated diguanylate cyclase.
 0.990
SDH22643.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 0.987
Your Current Organism:
Vibrio xiamenensis
NCBI taxonomy Id: 861298
Other names: CGMCC 1.10228, DSM 22851, V. xiamenensis, Vibrio sp. G21, Vibrio xiamenensis Gao et al. 2012, strain G21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.