STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_0915Peptidase M16 domain protein. (469 aa)    
Predicted Functional Partners:
J421_2407
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.947
J421_0764
Peptidase M16 domain protein.
 
    
0.930
J421_1260
Peptidase M16 domain protein.
 
    
0.912
J421_0916
Peptidase M16 domain protein.
 
    
0.839
J421_0300
Cytochrome c oxidase, subunit I.
   
 
 0.838
J421_1791
Cytochrome c oxidase, subunit II.
  
 0.769
J421_3290
NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.611
J421_3289
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein.
   
 
 0.584
J421_0917
Protein of unknown function DUF2847.
     
 0.540
J421_3291
NADH-quinone oxidoreductase, E subunit.
   
 
 0.519
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.