STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_1676Esterase. (364 aa)    
Predicted Functional Partners:
J421_1677
Protein of unknown function DUF1080.
 
     0.801
J421_4510
Glycoside hydrolase family 10.
 
   0.800
J421_1625
Amino acid adenylation domain protein.
  
  
 0.783
J421_1675
Protein of unknown function DUF820.
       0.773
J421_4511
Glycoside hydrolase family 10.
   0.698
J421_4525
GDSL family lipase.
  
   
 0.664
J421_0255
Alpha/beta hydrolase.
 
     0.627
J421_4514
Protein of unknown function DUF303 acetylesterase; Belongs to the glycosyl hydrolase 2 family.
  
   
 0.617
J421_0358
Endoglucanase H/Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
     0.594
J421_1674
Glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
     
 0.580
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.