STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_2004Hypothetical protein. (893 aa)    
Predicted Functional Partners:
J421_1372
Peptidase S9B dipeptidylpeptidase IV domain protein.
  
    0.672
J421_2171
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
 
    0.644
J421_1829
Putative S9C family peptidase.
  
    0.598
J421_4436
Peptidase M14 carboxypeptidase A.
  
     0.584
J421_4536
Peptidase M14 carboxypeptidase A.
  
     0.578
J421_1696
Peptidase M14 carboxypeptidase A.
  
     0.552
J421_1699
Peptidase M14 carboxypeptidase A.
  
     0.528
J421_1653
Peptidase S9 prolyl oligopeptidase active site domain protein.
  
    0.526
J421_4107
Peptidase S9B dipeptidylpeptidase IV domain protein.
  
    0.515
J421_2003
Hypothetical protein.
       0.512
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.