STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_2896Bacillithiol biosynthesis deacetylase, BshB1. (245 aa)    
Predicted Functional Partners:
J421_3229
Protein of unknown function UCP012535; Belongs to the BshC family.
 
  
 0.889
J421_3157
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
 
  0.879
J421_2895
Tryptophan 23-dioxygenase.
       0.773
J421_2070
Protein of unknown function DUF1094; Belongs to the UPF0403 family.
  
     0.693
J421_0917
Protein of unknown function DUF2847.
  
   
 0.567
J421_2897
Hypothetical protein.
       0.512
J421_1517
Protein of unknown function DUF2911.
  
     0.502
J421_2513
Von Willebrand factor type A.
  
     0.483
J421_2518
Magnesium chelatase subunit ChlI.
  
     0.482
J421_2173
Protein of unknown function DUF2911.
  
     0.474
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.