STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_3062MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal. (287 aa)    
Predicted Functional Partners:
J421_3063
CheB methylesterase.
  
 0.995
J421_0069
CheB methylesterase.
  
 0.987
J421_2238
CheB methylesterase.
  
 0.987
J421_2242
CheB methylesterase.
  
 0.987
J421_3055
ATP-binding region ATPase domain protein.
 
  
 0.969
J421_1143
Chemotaxis sensory transducer.
 
 0.940
J421_2405
Chemotaxis sensory transducer.
 
 0.940
J421_4049
Chemotaxis sensory transducer.
 0.937
J421_0160
Chemotaxis sensory transducer.
 0.931
J421_0415
Chemotaxis sensory transducer.
 0.931
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.