Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| J421_0897 | J421_1679 | J421_0897 | J421_1679 | Pyridoxal-5'-phosphate-dependent protein beta subunit. | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | 0.942 |
| J421_0897 | J421_2751 | J421_0897 | J421_2751 | Pyridoxal-5'-phosphate-dependent protein beta subunit. | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | 0.913 |
| J421_0897 | J421_2752 | J421_0897 | J421_2752 | Pyridoxal-5'-phosphate-dependent protein beta subunit. | L-serine dehydratase, iron-sulfur-dependent, alpha subunit. | 0.913 |
| J421_0897 | J421_3376 | J421_0897 | J421_3376 | Pyridoxal-5'-phosphate-dependent protein beta subunit. | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.900 |
| J421_0897 | glyA | J421_0897 | J421_3005 | Pyridoxal-5'-phosphate-dependent protein beta subunit. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.949 |
| J421_0897 | trpA | J421_0897 | J421_3362 | Pyridoxal-5'-phosphate-dependent protein beta subunit. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.924 |
| J421_1679 | J421_0897 | J421_1679 | J421_0897 | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | Pyridoxal-5'-phosphate-dependent protein beta subunit. | 0.942 |
| J421_1679 | J421_2751 | J421_1679 | J421_2751 | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | 0.914 |
| J421_1679 | J421_2752 | J421_1679 | J421_2752 | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | L-serine dehydratase, iron-sulfur-dependent, alpha subunit. | 0.914 |
| J421_1679 | J421_3376 | J421_1679 | J421_3376 | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.908 |
| J421_1679 | glyA | J421_1679 | J421_3005 | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.937 |
| J421_1679 | trpA | J421_1679 | J421_3362 | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.902 |
| J421_2751 | J421_0897 | J421_2751 | J421_0897 | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | Pyridoxal-5'-phosphate-dependent protein beta subunit. | 0.913 |
| J421_2751 | J421_1679 | J421_2751 | J421_1679 | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | 0.914 |
| J421_2751 | J421_2752 | J421_2751 | J421_2752 | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | L-serine dehydratase, iron-sulfur-dependent, alpha subunit. | 0.999 |
| J421_2751 | J421_3376 | J421_2751 | J421_3376 | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.900 |
| J421_2751 | glyA | J421_2751 | J421_3005 | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.948 |
| J421_2751 | trpA | J421_2751 | J421_3362 | L-serine dehydratase, iron-sulfur-dependent, beta subunit. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.901 |
| J421_2752 | J421_0897 | J421_2752 | J421_0897 | L-serine dehydratase, iron-sulfur-dependent, alpha subunit. | Pyridoxal-5'-phosphate-dependent protein beta subunit. | 0.913 |
| J421_2752 | J421_1679 | J421_2752 | J421_1679 | L-serine dehydratase, iron-sulfur-dependent, alpha subunit. | HAD-superfamily hydrolase, subfamily IB (PSPase-like). | 0.914 |
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