STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_4033Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD. (543 aa)    
Predicted Functional Partners:
J421_0108
Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156.
 
  
 
0.930
J421_0109
Virulence factor family protein.
 
   
 0.822
J421_4034
Zinc-binding alcohol dehydrogenase family protein.
  
    0.783
J421_4032
ASPIC/UnbV domain protein.
       0.554
J421_4035
Hypothetical protein.
       0.534
J421_1722
LysR substrate-binding protein.
  
   
 0.496
J421_1625
Amino acid adenylation domain protein.
  
   
 0.452
J421_3043
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
     
 0.452
J421_2231
Endonuclease/exonuclease/phosphatase.
  
  
 0.433
J421_1858
ROK family protein.
     
 0.413
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
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