STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_4034Zinc-binding alcohol dehydrogenase family protein. (330 aa)    
Predicted Functional Partners:
J421_2277
Alcohol dehydrogenase GroES domain protein.
  
  
 
0.923
J421_2723
Pyrrolo-quinoline quinone repeat-containing protein.
   
 
 0.915
J421_3024
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.911
J421_4056
Aldehyde Dehydrogenase.
  
 
 0.911
J421_1411
Amine oxidase.
    
  0.901
J421_2725
Pyrrolo-quinoline quinone repeat-containing protein.
   
 
 0.901
J421_4033
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD.
  
    0.783
J421_0814
Iron-containing alcohol dehydrogenase.
  
 
 0.697
J421_4032
ASPIC/UnbV domain protein.
       0.554
J421_3771
Phosphate acetyl/butaryl transferase.
  
  
 0.544
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
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