STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J421_4508Glycoside hydrolase family 9. (843 aa)    
Predicted Functional Partners:
J421_0362
Glycoside hydrolase family 9.
  
  
  0.968
J421_4513
Glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.949
J421_4509
Hypothetical protein.
 
 
   0.937
J421_0563
Glycoside hydrolase family 3 domain protein.
  
  
 0.936
J421_1674
Glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.918
J421_4511
Glycoside hydrolase family 10.
 
   
 0.825
J421_4510
Glycoside hydrolase family 10.
 
   
 0.797
J421_4506
Glycosyl hydrolase 67 middle domain protein; Belongs to the glycosyl hydrolase 67 family.
 
     0.789
J421_4517
Glycoside hydrolase family 43.
 
  
 0.787
J421_4507
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.773
Your Current Organism:
Gemmatirosa kalamazoonesis
NCBI taxonomy Id: 861299
Other names: ATCC BAA-2150, G. kalamazoonesis, Gemmatimonadetes bacterium KBS708, NCCB 100411, strain KBS708
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.