STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_00180Putative sortase; Identified by match to protein family PF04203. Sortase is a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall. (258 aa)    
Predicted Functional Partners:
AARI_00190
5.2 Protein of unknown function similar to proteins from other organisms.
 
   
 0.892
trpG
Anthranilate synthase is the first enzyme in the branch pathway in tryptophane biosynthesis. It catalyzes the biosynthesis of anthranilate from chorismate and glutamine.
       0.823
groEL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
      
 0.789
groEL-2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
      
 0.789
crgA
Conserved hypothetical membrane protein; Involved in cell division; Belongs to the CrgA family.
 
     0.679
AARI_09690
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
    0.579
AARI_02730
Putative sortase; Identified by match to protein family PF04203. Sortase is a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall. Possible role in synthesis of functional type 2 fimbriae.
  
     0.527
AARI_12830
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
  
     0.498
yidC
Putative preprotein translocase subunit YidC; The preprotein translocase itself comprises 7 proteins, including a chaperone protein (SecB), an ATPase (SecA), an integral membrane complex (SecCY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF). Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane compone [...]
 
   
 0.411
AARI_07880
Possible cell wall function protein; Match to protein domains PF03990 (DUF348 domain of unknown function), PF07501 (G5 domain) and PF06737 (transglycosylase-like domain). The PF07501 domain is also found in proteins involved in metabolism of bacterial cell walls suggesting this domain may have an adhesive function.
  
   
 0.406
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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