STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_00620Identified by match to protein family PF00171; Belongs to the aldehyde dehydrogenase family. (477 aa)    
Predicted Functional Partners:
gabT
4-aminobutyrate transaminase; Catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.933
AARI_25950
Putative aminotransferase; Identified by match to protein family PF00202: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.933
acsA
acetate--CoA ligase; Catalyzes the formation of acetyl-CoA from acetate and CoA.
   
 0.925
AARI_14920
Putative fatty-acid--Co-A ligase; Match to protein family PF00501. This family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.
   
 0.925
AARI_14930
Putative fatty-acid--Co-A ligase; Match to protein family PF00501. This family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.
   
 0.925
acsA-2
acetate--CoA ligase; Catalyzes the formation of acetyl-CoA from acetate and CoA.
   
 0.925
AARI_07370
Identified by match to protein family PF00171; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.922
AARI_27050
Putative Zn-dependent alcohol dehydrogenase; Catalyses the following reaction: an alcohol + NAD(+) <=> an aldehyde or ketone + NADH.
  
 0.918
mmsB
3-hydroxyisobutyrate dehydrogenase; Catalyzes the NAD-dependent, reversible oxidation of 3-hydroxbutyrate to methylmalonate. Involved in the catabolism of valine.
  
 
 0.913
mmsB-2
3-hydroxyisobutyrate dehydrogenase; Catalyzes the NAD-dependent, reversible oxidation of 3-hydroxbutyrate to methylmalonate. Involved in the catabolism of valine.
  
 
 0.913
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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