STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; Catalyses the following reaction: ATP + D-xylulose <=> ADP + D-xylulose 5-phosphate. Involved in the catabolism of xylose. (462 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose. It can also isomerize D-ribose to D-ribulose and D-glucose to D-fructose; Belongs to the xylose isomerase family.
 
 
 0.983
araD
L-ribulose-5-phosphate 4-epimerase; Catalyses the following reaction: L-ribulose 5-phosphate <=> D-xylulose 5-phosphate. Involved in the metabolism of L-arabinose.
  
 
 0.943
rpe
Ribulose-phosphate 3-epimerase; Involved in the pentose phosphate pathway. Catalyzes the interconversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.926
xylB-2
Xylulokinase; Catalyses the following reaction: ATP + D-xylulose <=> ADP + D-xylulose 5-phosphate. Involved in the catabolism of xylose.
  
  
 
0.907
AARI_01700
DeoR-family transcriptional regulator; DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway.
  
  
 0.803
glpQ-2
Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol).
       0.686
AARI_01730
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.686
mtlK
Mannitol 2-dehydrogenase catalyzes the NAD-dependent reduction of mannitol to fructose.
 
   
 0.656
AARI_01740
Identified by match to protein family PF03591.
       0.623
AARI_01750
Hypothetical membrane protein; 3 transmembrane helices predicted by TMHMM2.0.
       0.623
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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