STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_03020Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (185 aa)    
Predicted Functional Partners:
AARI_25220
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.705
AARI_03010
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.552
AARI_28470
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.549
AARI_03000
Conserved hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 1.000) with cleavage site probability 0.735 between position 34 and 35.
       0.483
AARI_03030
Identified by match to protein family PF01370: NAD dependent epimerase/dehydratase family. This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.
       0.479
AARI_10230
Putative molybdopterin oxidoreductase; Match to protein domain PF00174, which corresponds to the molybdopterin binding domain of oxidoreductases that require a molybdopterin cofactor.
  
     0.442
AARI_22170
Identified by match to PF00753: metallo-beta-lactamase superfamily. Apart from the beta-lactamases, a number of other proteins contain this domain. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake.
  
     0.424
AARI_02990
Putative Na+/H+ antiporter; CPA superfamily, monovalent cation:proton antiporter-1 (CPA1) family (TC 2.A.36.y.z). Na+/H+ antiporters are key transporters in maintaining the pH of actively metabolising cells.
       0.415
AARI_15050
HNH endonuclease domain-containing protein; Identified by match to PF01844.
  
     0.410
AARI_03210
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.409
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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