STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citHCitrate transporter; Identified by similarity to protein SP:Q6M8T2 (Corynebacterium glutamicum). IT superfamily, citrate-Mg2+:H+ (CitM) citrate-Ca2+:H+ (CitH) symporter (CitMHS) family (TC 2.A.11.y.z). (474 aa)    
Predicted Functional Partners:
citB
Two-component system response regulator CitB; Identified by similarity to protein SP:Q8NU70 (Corynebacterium glutamicum). CitAB controls citrate utilization in Corynebacterium glutamicum.
 
     0.562
AARI_27940
Putative lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
      
 0.483
AARI_28020
Putative lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
      
 0.483
AARI_26990
Conserved hypothetical membrane protein; 7 transmembrane helices predicted by TMHMM2.0.
  
     0.448
glpQ
Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol).
      
 0.436
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
      
 0.428
dhbA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Involved in the third stage of enterobactin (siderophore peptide) biosynthesis, the conversion of 2,3-dihydro-2,3-dihydroxybenzoate into 2,3-dihydroxybenzoate.
   
  
 0.427
glpQ-2
Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol).
      
 0.424
glpQ-3
Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol).
      
 0.424
AARI_32100
N-terminal section of the protein: COG4781 (membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase); 7 transmembrane helices predicted by TMHMM2.0. C-terminal section of the protein: match to PF03009 (glycerophosphoryl diester phosphodiesterase family). Escherichia coli has two sequence related isozymes of glycerophosphoryl diester phosphodiesterase (GDPD) - periplasmic and cytosolic. glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and [...]
      
 0.424
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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