Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AARI_03100 | AARI_03110 | Putative phosphotransferase; Match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. | Putative secreted alcaline phosphatase; Catalyses the following reaction : a phosphate monoester + H(2)O <=> an alcohol + phosphate. | 0.529 |
AARI_03100 | AARI_19180 | Putative phosphotransferase; Match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.584 |
AARI_03100 | AARI_26480 | Putative phosphotransferase; Match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.469 |
AARI_03110 | AARI_03100 | Putative secreted alcaline phosphatase; Catalyses the following reaction : a phosphate monoester + H(2)O <=> an alcohol + phosphate. | Putative phosphotransferase; Match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. | 0.529 |
AARI_19180 | AARI_03100 | 5.2 Protein of unknown function similar to proteins from other organisms. | Putative phosphotransferase; Match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. | 0.584 |
AARI_26480 | AARI_03100 | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | Putative phosphotransferase; Match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. | 0.469 |