STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_03710Conserved hypothetical membrane protein; 3 transmembrane helices predicted by TMHMM2.0. (588 aa)    
Predicted Functional Partners:
AARI_03730
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
  
 0.954
AARI_29470
Identified by match to protein family PF02534. The TraG family are bacterial conjugation proteins. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome although the exact mechanism of action is unknown.
  
  
 
0.927
AARI_03690
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.903
AARI_03780
Conserved hypothetical membrane protein; 7 transmembrane helices predicted by TMHMM2.0.
 
   
 0.828
AARI_03770
Conserved hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
 
   
 0.798
AARI_03840
Match to protein family PF02195. Proteins containing this domain, appear to be related to the Escherichia coli plasmid protein ParB, which preferentially cleaves single-stranded DNA.
 
   
 0.798
AARI_03720
6 Protein of unknown function, without similarity to other proteins.
       0.794
AARI_04030
Putative conjugal transfer protein; Match to PF08751: TrwC relaxase. Similar to proteins involved in the conjugal tranfer of plasmids.
 
   
 0.792
AARI_03740
6 Protein of unknown function, without similarity to other proteins.
       0.790
AARI_03890
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
    0.789
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.