STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_04440Hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 1.000) with cleavage site probability 0.321 between position 26 and 27. (222 aa)    
Predicted Functional Partners:
AARI_04450
acetyl-CoA C-acyltransferase (also named 3-ketoacyl-CoA thiolase or thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation; Belongs to the thiolase-like superfamily. Thiolase family.
       0.458
AARI_04430
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
       0.455
pcaI
3-oxoadipate CoA-transferase subunit A; Identified by similarity to protein SP:Q01103 (Pseudomonas putida). Catalyses the following reaction : succinyl-CoA + 3-oxoadipate = succinate + 3-oxoadipyl-CoA.
       0.427
pcaJ
3-oxoadipate CoA-transferase subunit B; Identified by similarity to protein SP: P0A102 (Pseudomonas putida). Catalyses the following reaction : succinyl-CoA + 3-oxoadipate = succinate + 3-oxoadipyl-CoA.
       0.427
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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