node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AARI_05290 | AARI_15080 | AARI_05290 | AARI_15080 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0109 family. | 0.583 |
AARI_05290 | AARI_26160 | AARI_05290 | AARI_26160 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | Match to protein family PF00724: NADH:flavin oxidoreductase / NADH oxidase family. | 0.579 |
AARI_05290 | cysS | AARI_05290 | AARI_05310 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | cysteine--tRNA ligase; Activates cysteine and transfers it to tRNA(Cys) as the first step in protein biosynthesis; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.539 |
AARI_05290 | ispDF | AARI_05290 | AARI_05300 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.772 |
AARI_05290 | rbpA | AARI_05290 | AARI_16490 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.999 |
AARI_05290 | rpoA | AARI_05290 | AARI_23210 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AARI_05290 | rpoB | AARI_05290 | AARI_23600 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AARI_05290 | rpoC | AARI_05290 | AARI_23590 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | DNA-directed RNA polymerase beta prime chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AARI_05290 | rpoD | AARI_05290 | AARI_20220 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.999 |
AARI_05290 | rpoZ | AARI_05290 | AARI_17090 | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
AARI_15080 | AARI_05290 | AARI_15080 | AARI_05290 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms; Belongs to the UPF0109 family. | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | 0.583 |
AARI_26160 | AARI_05290 | AARI_26160 | AARI_05290 | Match to protein family PF00724: NADH:flavin oxidoreductase / NADH oxidase family. | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | 0.579 |
cysS | AARI_05290 | AARI_05310 | AARI_05290 | cysteine--tRNA ligase; Activates cysteine and transfers it to tRNA(Cys) as the first step in protein biosynthesis; Belongs to the class-I aminoacyl-tRNA synthetase family. | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | 0.539 |
cysS | ispDF | AARI_05310 | AARI_05300 | cysteine--tRNA ligase; Activates cysteine and transfers it to tRNA(Cys) as the first step in protein biosynthesis; Belongs to the class-I aminoacyl-tRNA synthetase family. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.657 |
ispDF | AARI_05290 | AARI_05300 | AARI_05290 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | 0.772 |
ispDF | cysS | AARI_05300 | AARI_05310 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | cysteine--tRNA ligase; Activates cysteine and transfers it to tRNA(Cys) as the first step in protein biosynthesis; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.657 |
rbpA | AARI_05290 | AARI_16490 | AARI_05290 | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes. | 0.999 |
rbpA | rpoA | AARI_16490 | AARI_23210 | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rbpA | rpoB | AARI_16490 | AARI_23600 | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rbpA | rpoC | AARI_16490 | AARI_23590 | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | DNA-directed RNA polymerase beta prime chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |