STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_05500Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (96 aa)    
Predicted Functional Partners:
AARI_05510
Conserved hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
  
    0.735
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.589
AARI_10020
Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family.
  
     0.565
AARI_21370
Match to protein family PS51198: UvrD-like DNA helicase ATP-binding domain profile and PS51217: DNA helicase, UvrD-like, C terminal. UvrD-like DNA helicases belong to superfamily 1 (SF1); Belongs to the helicase family. UvrD subfamily.
  
     0.526
AARI_15250
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.497
AARI_00040
Conserved hypothetical protein; Match to protein family PF05258. This family contains several actinomycete proteins of unknown function.
  
     0.442
AARI_19830
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.435
AARI_21030
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.432
groEL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.420
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.401
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.