Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AARI_06260 | AARI_06270 | AARI_06260 | AARI_06270 | Major facilitator superfamily (MFS), aromatic acid:H+ symporter (AAHS) family (TC 2.A.1.15.z). Members of this family transport compounds such as benzoate, hydroxybenzoate, niacin. | 6 Protein of unknown function, without similarity to other proteins. | 0.524 |
AARI_06270 | AARI_06260 | AARI_06270 | AARI_06260 | 6 Protein of unknown function, without similarity to other proteins. | Major facilitator superfamily (MFS), aromatic acid:H+ symporter (AAHS) family (TC 2.A.1.15.z). Members of this family transport compounds such as benzoate, hydroxybenzoate, niacin. | 0.524 |
AARI_06270 | purH | AARI_06270 | AARI_06280 | 6 Protein of unknown function, without similarity to other proteins. | Bifunctional purine biosynthesis protein PurH; Catalyses the last two steps in de novo purine biosynthesis. Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) catalyses the formylation of AICAR with 10-formyl-tetrahydrofolate to yield FAICAR (5-formylaminoimidazole-4-carboxamide ribonucleotide) and tetrahydrofolate. IMP cyclohydrolase (EC 3.5.4.10) catalyses the formation of IMP from FAICAR. | 0.528 |
purH | AARI_06270 | AARI_06280 | AARI_06270 | Bifunctional purine biosynthesis protein PurH; Catalyses the last two steps in de novo purine biosynthesis. Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) catalyses the formylation of AICAR with 10-formyl-tetrahydrofolate to yield FAICAR (5-formylaminoimidazole-4-carboxamide ribonucleotide) and tetrahydrofolate. IMP cyclohydrolase (EC 3.5.4.10) catalyses the formation of IMP from FAICAR. | 6 Protein of unknown function, without similarity to other proteins. | 0.528 |